A B C D E F G H I J L M N O P Q R S T U V W Z

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get4Connectivity() - Static method in class br.usp.ime.klava.segmentit.util.Messages

get8Connectivity() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getAbout() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getAction() - Method in enum br.usp.ime.klava.segmentit.gui.Tool

Returns the action triggered by the tool.

getActiveBasin(int, int) - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the the active basin that contains the pixel located at ( x,y).

getActiveDocument() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationContainer

Returns the active SegmentationDocument.

getActiveLabels() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyManager

Returns the active labels of each leaf node of the hierarchy.

getActiveLabels() - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the active labels of each leaf node of the hierarchy.

getAlpha() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getApplyGradient() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getApplyGradientDescription() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getArea() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getArrangeWorkspace() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getArrangeWorkspaceDescription() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getBackgroundColor() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the background color.

getBackgroundColor() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getBasin(int) - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns the vertex labeled by label.

getBasin1() - Method in class br.usp.ime.klava.segmentit.structures.Edge

Getter for the basin1.

getBasin2() - Method in class br.usp.ime.klava.segmentit.structures.Edge

Getter for the basin2.

getBasinsColor() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getBasinsImage() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the segmentation result (catchment basins).

getBasinsImage(ColorSpace) - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns an image with each PrimitiveCatchmentBasin painted with a unique color.

getBasinsImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getBordersBrush() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getBordersBrushMiniHelp() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getBoundaryImage(BufferedImage, Color) - Static method in class br.usp.ime.klava.segmentit.util.ImageUtils

Returns an image containing the boundary of the given input image.

getBrightness() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getBrushColor() - Method in class br.usp.ime.klava.segmentit.gui.MarkersEditor

Returns the color of the brush.

getBrushColor() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getBrushDiameter() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getBrushEraser() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getBrushEraserMiniHelp() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getBrushesColor() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the color of the brushes.

getCancel() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getChangeBackgroundColor() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getChangeBrushColor() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getChangeWatershedColor() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getChildren() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyInternalNode

getChildren() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyLeaf

getChildren() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyNode

Returns the HierarchyNodes from which this HierarchyNode was constructed.

getChooseStructuringElementSize() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getChooseWeights() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getClosing() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getColor(int, int) - Method in class br.usp.ime.klava.segmentit.gui.MarkersEditor

Returns the color of the pixel localized at (x, y).

getColor() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyNode

Returns the random Color associated to this HierarchyNode .

getColor(int, int) - Method in enum br.usp.ime.klava.segmentit.util.ColorSpace

Return a unique Color for each index in the interval [1, max].

getColor(int, int, BufferedImage) - Static method in class br.usp.ime.klava.segmentit.util.ImageUtils

Returns the Color of the pixel of at (x, y) in the image.

getColor() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getColorFilters() - Static method in class br.usp.ime.klava.segmentit.filters.Filters

Returns a list of the available ColorFilters.

getColorMatrix(BufferedImage) - Static method in class br.usp.ime.klava.segmentit.util.MatrixImagesUtils

Constructs a matrix of Colors that represents the given image.

getColorSelector() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getColorSelectorMiniHelp() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getColorSpace() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the ColosSpace used to paint the basins.

getColorToGray() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getConfirmFileOverloading(String) - Static method in class br.usp.ime.klava.segmentit.util.Messages

getConnectivity() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationContainer

Returns the Connectivity being used.

getConnectivity() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the Connectivity being used.

getConnectivity() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns the adjacency relation between pixels used to build the primitive catchment basins of this graph.

getCost() - Method in class br.usp.ime.klava.segmentit.structures.Pixel

Returns the cost of this Pixel.

getCostString() - Method in class br.usp.ime.klava.segmentit.structures.Pixel

Returns a String representation of the cost of this Pixel.

getCurrentState() - Method in class br.usp.ime.klava.segmentit.util.UndoRedo

Returns the current state.

getDefaultColorSpace() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getDepth() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getDescription() - Method in class br.usp.ime.klava.segmentit.formats.MarkerFormat

Returns a description of the supported format for reading or writing markers files.

getDescription() - Method in class br.usp.ime.klava.segmentit.formats.ReadFormats

Returns a description of the supported formats for reading image files.

getDescription() - Method in class br.usp.ime.klava.segmentit.formats.WriteFormat

Returns a description of the format for writing image files of this filter.

getDilation() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getDisplay() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getDisplayOnlySelectedRegion() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getDist() - Method in class br.usp.ime.klava.segmentit.util.Cost

Returns the value of dist (second component of the cost).

getDocumentName() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the document name.

getEdgeType() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyEdge

Getter for the type property.

getEdgeType() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyInternalNode

Returns the type of the edge that generated this HierarchyInternalNode.

getEdgeWeightIndex(int) - Method in class br.usp.ime.klava.segmentit.structures.HierarchyManager

Returns the index of the given weight in the array of existing edges weights.

getEdgeWeightIndex(int) - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the hierarchy weight associated with index

getEdit() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getEraseMarkers() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getEraseMarkersQuestion() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getErosion() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getError() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getErrorCriteriumColorImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getErrorLoadingFilter(String) - Static method in class br.usp.ime.klava.segmentit.util.Messages

getErrorNotSupportedImageFile(String) - Static method in class br.usp.ime.klava.segmentit.util.Messages

getErrorReadingFile(String) - Static method in class br.usp.ime.klava.segmentit.util.Messages

getErrorWritingFile(String) - Static method in class br.usp.ime.klava.segmentit.util.Messages

getExtension(File) - Static method in class br.usp.ime.klava.segmentit.formats.ImageFileFormats

Returns the extension of a given file.

getExtension() - Method in class br.usp.ime.klava.segmentit.formats.MarkerFormat

Returns the extension that this filter accepts.

getExtension() - Method in class br.usp.ime.klava.segmentit.formats.WriteFormat

Returns the extension that this filter accepts.

getFile() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getFilter() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the Filter being used.

getFilteredImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getFilters() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getFrame(int, int, Color) - Static method in class br.usp.ime.klava.segmentit.util.ImageUtils

Returns an image with a frame (first and last line and columns of pixels) painted

getGeneratorPixel1() - Method in class br.usp.ime.klava.segmentit.structures.Edge

Getter for the generatorPixel1.

getGeneratorPixel2() - Method in class br.usp.ime.klava.segmentit.structures.Edge

Getter for the generatorPixel2.

getGeneratorPixelBetween(PrimitiveCatchmentBasin, PrimitiveCatchmentBasin) - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns the pixel of basin1 that generated the edge linking basin1 to basin2.

getGranularity() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationContainer

Returns the Granularity being used.

getGranularity() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the Granularity being used.

getGraphFromFilteredImage() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyManager

Returns the PrimitiveCatchmentBasinsGraph derived from the filtered imaged used in this HierarchyManager.

getGrayLevel() - Method in class br.usp.ime.klava.segmentit.structures.Pixel

Returns the gray level of this Pixel.

getGrayLevelFilters() - Static method in class br.usp.ime.klava.segmentit.filters.Filters

Returns a list of the available GrayLevelFilters.

getGrayLevelMatrix(BufferedImage) - Static method in class br.usp.ime.klava.segmentit.util.MatrixImagesUtils

Constructs a matrix of ints that represents the given image.

getHeight() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns the height of the image represented by this graph.

getHelp() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getHideFilteredImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getHideFilteredImageDescription() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getHierarchicalSegmentation() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getHierarchy() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getHierarchyCriterion() - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the HierarchyCriterion utilized to build the nested partitions set.

getHierarchyCriterion() - Method in class br.usp.ime.klava.segmentit.util.HierarchyState

Returns the criterion from with the hierarchy was derived.

getHierarchyCriterion() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getHierarchyMiniHelp() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getHierarchyNavigation() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getHierarchyNavigationHelp() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getHierarchyRoot() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyManager

Returns the root node of the hierarchy.

getHierarchyRoot() - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the root node of the hierarchy.

getHierarchyThreshold() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getHistogram() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasin

Returns the histogram of the gray levels of the Pixels in this PrimitiveCatchmentBasin.

getHue() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getHuesColorSpace() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getIcon() - Method in enum br.usp.ime.klava.segmentit.gui.Tool

Returns the icon of the tool.

getIcon(String) - Static method in class br.usp.ime.klava.segmentit.util.GUIUtils

Returns an ImageIcon containing the image stored in iconFilename.

getImage(int[][]) - Static method in class br.usp.ime.klava.segmentit.util.MatrixImagesUtils

Returns an image with the gray levels given by the grayLevelMatrix.

getImageWithoutColor(BufferedImage, Color) - Static method in class br.usp.ime.klava.segmentit.util.ImageUtils

Returns a new BufferedImage, removing color from input.

getIncidentEdges(int) - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns a List of Edges that links the vertex labeled by label to its neighbors.

getIncidentEdges(PrimitiveCatchmentBasin) - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns a List of Edges that links basin to its neighbors.

getInputImage() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the input image.

getInputImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.About

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.ArrangeWorkspace

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.BackgroundColor

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.BasinsColor

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.Connectivity4

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.Connectivity8

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.OpenImage

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.OpenMarkersImage

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.OpenPartitionImage

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.PixelsGranularity

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.Quit

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.Redo

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.RegionsGranularity

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.SaveMarkersImage

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.SavePartitionImage

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.SaveSegmentedImage

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.SegmentAutomatically

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.SupportedFormatsHelp

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.Undo

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.actions.WatershedColor

Returns the unique instance (singleton) of this action.

getInstance() - Static method in class br.usp.ime.klava.segmentit.gui.SegmentationContainer

Returns the unique instance of SegmentationContainer.

getLabel() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyNode

Returns the label of this HierarchyNode.

getLabel() - Method in class br.usp.ime.klava.segmentit.structures.Pixel

Return the label of this Pixel.

getLabel() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasin

Returns the label of this PrimitiveCatchmentBasin.

getLabelActiveBasin(int, int) - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the label of the active basin that contains the pixel located at (x,y).

getLabels() - Method in class br.usp.ime.klava.segmentit.util.HierarchyState

Returns a labeling function that determines the selected partition.

getLayers() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the layers panel.

getLayers() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getLogger() - Static method in class br.usp.ime.klava.segmentit.util.LoggerBuilder

Builds a Logger named by the caller class.

getMarkedPixels(BufferedImage) - Static method in class br.usp.ime.klava.segmentit.util.MatrixImagesUtils

Returns a matrix of Booleans that indicates if each pixel of image is marked (not transparent).

getMarkerFormatFileChooser() - Static method in class br.usp.ime.klava.segmentit.gui.FileChooser

Returns a JFileChooser using the MarkerFormat filter.

getMarkersFormat() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getMarkersImage() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the markers image.

getMarkersImage() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyManager

Returns markers that recovers exactly the selected partition when applied back on the RAG.

getMarkersImage(PrimitiveCatchmentBasinsGraph, TreeOfCriticalLakes) - Static method in class br.usp.ime.klava.segmentit.util.MarkersFromPartition

Returns an image containing markers that crosses all the NRRRs of each region of interest of the partition to be recovered.

getMarkersImage(PrimitiveCatchmentBasinsGraph, int[]) - Static method in class br.usp.ime.klava.segmentit.util.MarkersFromPartition

Returns an image containing markers that crosses all the NRRRs of each region of interest of the partition to be recovered.

getMarkersImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getMax() - Method in class br.usp.ime.klava.segmentit.util.Cost

Returns the value of max (first component of the cost).

getMaxEdgeValue() - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the greatest edge weight existing in the spanning tree from which the hierarchy was built.

getMaximumBasin() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyNode

Returns the currently highest HierarchyNode of the hierarchy that contains this HierarchyNode.

getMaxLabel() - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the last nextAvailableLabel used for a HierarchyNode in this hierarchy.

getMean() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getMerge() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getMergingLevel() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getMetric() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyNode

Returns the AbstractMetric associated with this HierarchyNode.

getMetricObject() - Method in class br.usp.ime.klava.segmentit.util.HierarchyCriterion

Returns a new instance of the AbstractMetric associated with this HierarchyCriterion.

getMiniHelp() - Method in enum br.usp.ime.klava.segmentit.gui.Tool

Returns a help information about the usage of the tool.

getMiniHelpTooltip() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getMinimumLevel() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasin

Returns the minimum gray level in this PrimitiveCatchmentBasin.

getMinimumVisualization() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasin

Returns a double precision point located at the center of a pixel of the regional minimum of this PrimitiveCatchmentBasin for visualization purposes.

getMinPriority() - Method in class br.usp.ime.klava.segmentit.structures.PriorityQueue

Returns the priority of the element with the highest prSmaller priority numbers represents higher priorities.iority.

getMorphologicalGradient() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getName() - Method in class br.usp.ime.klava.segmentit.filters.Closing

getName() - Method in class br.usp.ime.klava.segmentit.filters.ColorToGray

getName() - Method in class br.usp.ime.klava.segmentit.filters.ColorToGrayAndMorphologicalGradient

getName() - Method in class br.usp.ime.klava.segmentit.filters.Dilation

getName() - Method in class br.usp.ime.klava.segmentit.filters.Erosion

getName() - Method in interface br.usp.ime.klava.segmentit.filters.Filter

Returns the name of the filter.

getName() - Method in class br.usp.ime.klava.segmentit.filters.MorphologicalGradient

getName() - Method in class br.usp.ime.klava.segmentit.filters.None

getName() - Method in class br.usp.ime.klava.segmentit.filters.Opening

getName() - Method in class br.usp.ime.klava.segmentit.filters.WeightedGradient

getName() - Method in enum br.usp.ime.klava.segmentit.gui.Tool

Returns the name of the tool.

getName() - Method in class br.usp.ime.klava.segmentit.util.HierarchyCriterion

Returns the name of this HierarchyCriterion.

getNeighbors(Pixel[][], Pixel) - Method in enum br.usp.ime.klava.segmentit.util.Connectivity

Returns a list with the neighbors of the pixel in the given matrix.

getNeighbors(T[][], int, int) - Method in enum br.usp.ime.klava.segmentit.util.Connectivity

Returns a list with the neighbors of the element localized at (x,y) in the given matrix.

getNextAvailableLabel() - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the nextAvailableLabel for a HierarchyNode in this hierarchy, incrementing in.

getNode(int) - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the PrimitiveCatchmentBasin labeled by label.

getNode1() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyEdge

Getter for the node1.

getNode2() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyEdge

Getter for the node2.

getNone() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getNormalizedPotency(BufferedImage, double) - Static method in class br.usp.ime.klava.segmentit.util.ImageUtils

Return an image where the gray level of each output pixel is given by the equation: output = round(input^alpha * 255^(1-alpha)), where round(x) returns the integer most close to x and input is the gray level of the corresponding pixel in the input image.

getNumNodes() - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the number of nodes in this hierarchy.

getNumPixels() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyInternalNode

getNumPixels() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyLeaf

getNumPixels() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyNode

Returns the number of pixels in this HierarchyNode.

getNumPixels() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasin

Returns the number of Pixels that belongs to this PrimitiveCatchmentBasin.

getNumVertices() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns the number of vertices of this graph.

getOK() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getOpacity() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getOpenImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getOpening() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getOpenMarkersImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getOpenPartitionImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getOptions() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getOrderedEdges() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns a List with the edges of this graph, ordered by their weights.

getOuterBoundaryImage(BufferedImage, Color) - Static method in class br.usp.ime.klava.segmentit.util.ImageUtils

Returns an image containing the outer boundary of the given input image.

getOutOfMemoryError() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getParent() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyNode

Returns the HierarchyInternalNode that contains directly this HierarchyNode (its parent in the TreeOfCriticalLakes).

getPathsFromBasin(PrimitiveCatchmentBasin, int[]) - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns the predecessors map that defined the paths from basin to all other basins of the same label as it (within the region of interest)

getPixelLevelOfPrecision() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getPixels() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasin

Returns a List with the Pixels that belongs to this PrimitiveCatchmentBasin.

getPixels() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns the pixels of the image represented by this graph.

getPixelsMatrix(BufferedImage) - Static method in class br.usp.ime.klava.segmentit.util.MatrixImagesUtils

Constructs a matrix of Pixels that represents the given image.

getPredecessor() - Method in class br.usp.ime.klava.segmentit.structures.Pixel

Returns the predecessor of this Pixel in a path from a marker pixel.

getPrimitiveCatchmentBasin() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyLeaf

Returns the PrimitiveCatchmentBasin encapsulated in the HierarchyLeaf.

getQuit() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getRAG() - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the PrimitiveCatchmentBasinsGraph from which this hierarchy was built.

getRandomizeColors() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getReadFormats() - Static method in class br.usp.ime.klava.segmentit.formats.ImageFileFormats

Returns the formats supported to read image files.

getReadFormats() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getReadFormatsFileChooser() - Static method in class br.usp.ime.klava.segmentit.gui.FileChooser

Returns a JFileChooser using the ReadFormats filter.

getRedo() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getRefine() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getRegionalMinimumPixel() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasin

Returns a Pixel of this PrimitiveCatchmentBasin regional minimum.

getRegionLevelOfPrecision() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getSaturation() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getSavedPath() - Static method in class br.usp.ime.klava.segmentit.util.FileUtils

Returns the last path saved.

getSaveMarkersImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getSavePartitionImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getSaveSegmentedImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getScaledInstance(BufferedImage, double) - Static method in class br.usp.ime.klava.segmentit.util.ImageUtils

Returns an scaled version of the input image.

getSegment() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getSegmentAutomatically() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getSegmentAutomaticallyDescription() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getSegmentedImage() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the segmentation result superimposing the visible layers.

getSelectColorSpace() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getSelectedTool() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getSide() - Method in enum br.usp.ime.klava.segmentit.util.StructuringElement

Returns the size (width and height are equal) of this square structuring element.

getSiteTooltip() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getSupportedFormats() - Static method in class br.usp.ime.klava.segmentit.formats.ImageFileFormats

Returns a description of the supported formats for reading and writing image files.

getSupportedFormats() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getTCLWeights() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyManager

Returns the weights of the edges in the hierarchy.

getThreshold() - Method in class br.usp.ime.klava.segmentit.util.HierarchyState

Returns the threshold used to select a partition from the hierarchy.

getToolTitle() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getType() - Method in class br.usp.ime.klava.segmentit.util.HierarchyState

Return the type of this state.

getUndo() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getUnifiedLabels(PrimitiveCatchmentBasinsGraph, Pixel[][]) - Static method in class br.usp.ime.klava.segmentit.util.GranularitiesUtils

Returns a labeling to graph unifying the labels in pixels within each PrimitiveCatchmentBasin.

getUnifiedLabels(PrimitiveCatchmentBasinsGraph, BufferedImage) - Static method in class br.usp.ime.klava.segmentit.util.GranularitiesUtils

Returns a labeling to graph unifying the labels in desiredPartitions within each PrimitiveCatchmentBasin.

getUseAutomaticWeights() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getValue(int) - Method in class br.usp.ime.klava.segmentit.metrics.AbstractMetric

Returns the value of this metric given the waterLevel.

getValue(int) - Method in class br.usp.ime.klava.segmentit.metrics.Area

getValue(int) - Method in class br.usp.ime.klava.segmentit.metrics.Depth

getValue(int) - Method in class br.usp.ime.klava.segmentit.metrics.MeanValue

getValue(int) - Method in class br.usp.ime.klava.segmentit.metrics.MergingLevel

getValue(int) - Method in class br.usp.ime.klava.segmentit.metrics.Volume

getValue(int) - Method in class br.usp.ime.klava.segmentit.structures.HierarchyNode

Returns the value of the metric of this HierarchyNode according to the metric used to build the hierarchy.

getVersion() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getVertices() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns a List with the vertices of this graph.

getVolume() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getWatershedColor() - Method in class br.usp.ime.klava.segmentit.gui.SegmentationDocument

Returns the color of the watershed lines.

getWatershedImage() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getWatershedLinesColor() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getWeight() - Method in class br.usp.ime.klava.segmentit.structures.Edge

Getter for the weight.

getWeight() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyEdge

Getter for the weight.

getWeight() - Method in class br.usp.ime.klava.segmentit.structures.HierarchyInternalNode

Returns the weight of the edge that generated this HierarchyInternalNode.

getWeight(int) - Method in class br.usp.ime.klava.segmentit.structures.HierarchyManager

Returns the hierarchy weight associated with index

getWeightedGradient() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getWeights() - Method in class br.usp.ime.klava.segmentit.structures.TreeOfCriticalLakes

Returns the weights of the edges in the hierarchy.

getWeldingBrush() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getWeldingBrushMiniHelp() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getWidth() - Method in class br.usp.ime.klava.segmentit.structures.PrimitiveCatchmentBasinsGraph

Returns the width of the image represented by this graph.

getWriteFormatFilters() - Static method in class br.usp.ime.klava.segmentit.formats.WriteFormat

Returns a list with a WriteFormat filter for each supported format for writing image files.

getWriteFormats() - Static method in class br.usp.ime.klava.segmentit.formats.ImageFileFormats

Returns the formats supported to write image files.

getWriteFormats() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getWriteFormatsFileChooser() - Static method in class br.usp.ime.klava.segmentit.gui.FileChooser

Returns a JFileChooser using the WriteFormat filters.

getX() - Method in class br.usp.ime.klava.segmentit.structures.Pixel

Returns the x-coordinate of this Pixel.

getY() - Method in class br.usp.ime.klava.segmentit.structures.Pixel

Returns the y-coordinate of this Pixel.

getZoom() - Static method in class br.usp.ime.klava.segmentit.util.Messages

getZoomLevel() - Method in class br.usp.ime.klava.segmentit.gui.ZoomableImageIcon

Getter of the zoomLevel property.

getZoomMiniHelp() - Static method in class br.usp.ime.klava.segmentit.util.Messages

gradient(int[][], int) - Static method in class br.usp.ime.klava.segmentit.filters.MorphologicalGradient

Returns the morphological gradient of the image represented by matrix.

GranularitiesUtils - Class in br.usp.ime.klava.segmentit.util

Performs operations involving partitions at Pixel and PrimitiveCatchmentBasin granularities.

GranularitiesUtils() - Constructor for class br.usp.ime.klava.segmentit.util.GranularitiesUtils

Granularity - Enum in br.usp.ime.klava.segmentit.util

Represents which granularity is used in watershed from markers algorithm.

GrayLevelFilter - Interface in br.usp.ime.klava.segmentit.filters

Represents a filter that has a gray level image as its input.

greaterThan(Cost) - Method in class br.usp.ime.klava.segmentit.util.Cost

Returns if this cost is greater than the given cost.

GUIUtils - Class in br.usp.ime.klava.segmentit.util

Provides utility methods to be used in GUI elements.

GUIUtils() - Constructor for class br.usp.ime.klava.segmentit.util.GUIUtils